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Table 2 Primer information

From: A comparative study on the regulatory region of the PERIOD1 gene among diurnal/nocturnal primates

Purposes of use

Primer ID

Primer names

Species

Region

Length (bp)

Sequences (5′ → 3′)

PCR & Sequencing

#1

PER11stPRMF

Primates

Promoter

22

GCCCCCTCGCCTCCATTGACGG

 

#2

PER11stINT1R

Primates

Intron1

24

GGGGGCAGGGAGAGGGTGGGTAGC

 

#3

PER12ndPRMF

Primates

Promoter

23

GCTGGGCGGTGTCTGGGGCTCTT

 

#4

PER12ndEX2R

Primates

Exon2

28

AACCATTGCTGTTGGCATCGGTGTCATC

 

#5

GenPER1_1stPRM_R

Primates

Promoter

24

CTGAAGAGCCCCAGACACCGCCCA

Sequencing

#6

PER1PRM_PW1

Primates

Promoter

20

GGATCATTTTCAGGGAGAGG

 

#7

PER1PRM_PW2

Primates

Promoter

21

ATATGAAGCCCTTGCCATCCC

 

#8

GenPER1_PRM_PW1

Primates

Promoter

21

CGGCGGGCAGGCAGACGGAGG

 

#9

PER1INT1_PW3

Primates

Intron1

20

CAGAGGGCACACCGTCGTCC

 

#10

GenPER1_INT1_PW2

Primates

Intron1

21

GGCGCTAGTTCCTGCTGTTGG

 

#11

GenPER11stPRM_PW1

Primates

Promoter

21

CTATAATCCTAGCACTTTGGG

 

#12

PER1PRM_PW5R

Primates

Promoter

20

GGTGTCTAGTACTTCCCTCC

 

#13

GenPER1_PW3R

Strepsirrhines

Exon1

20

GTCCTCCGCACGCCTGCCCG

 

#14

ShoPER1_PW1

Lesser galago

Promoter

21

CCCTAGGCCGGCTGTGATGTC

 

#15

PER1INT1_PW4

Primates

Intron1

20

AGGGGCTAAAGAAGGAAAGG

 

#16

GenPER1_PW4R

Strepsirrhines

Intron1

20

CCCACGCTCCTAGGACCCAG

 

#17

OLPER1_PW1

Strepsirrhines

Promoter

20

GACCAGCCTAAGCGAGACCC

 

#18

ShoPER1_PW2

Strepsirrhines

Promoter

21

GATGGAGGGGCTCTGTAACTG

 

#19

LGPER1_PRM3

Strepsirrhines

Promoter

22

TACTCACCCTCTAAACACGTGG

 

#20

LemurPER1_PW1

Strepsirrhines

Promoter

20

TGTCCCTCTGTAGTCCTAGC

  1. The column “species” means the group that has used its primer for PCR and sequencing (e.g., primer ID #13 cannot be used to sequence the upstream of haplorhines PER1 but can be used for that of strepsirrhines)