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Table 3 Summary of the reads and mapping results

From: NOD-like receptors mediate inflammatory lung injury during plateau hypoxia exposure

Sample 0–1 days 0–2 days 0–3 days 0-day mean 28–1 day 28–2 days 28–3 days 28-day mean
Total raw reads (M) 39.91 44.84 42.63 42.46 61.40 57.87 55.32 58.20
Total clean reads (M) 39.22 43.79 41.72 41.58 59.69 56.06 53.75 56.50
Total clean bases (Gb) 5.88 6.57 6.26 6.24 8.95 8.41 8.06 8.47
Clean reads Q20 (%) 97.91 97.75 96.72 97.46 97.35 97.79 97.31 97.48
Clean reads Q30 (%) 94.19 93.86 91.69 93.25 92.82 93.82 92.77 93.14
Clean reads ratio (%) 98.28 97.65 97.85 97.93 97.22 96.88 97.16 97.09
Total mapping (%) 93.10 92.94 92.37 92.80 95.05 94.34 94.7 94.70
Multiple mapping (%) 4.6 4.91 4.51 4.67 5.6 5.98 5.56 5.71
Unique mapping (%) 88.51 88.04 87.86 88.14 89.44 88.37 89.14 88.98
GC (%) 48.66 49.18 48.75 48.86 50.36 50.54 50.14 50.35