Skip to main content

Table 2 Protein-coding genes in the top 100 combined rank of all autosomal genes

From: Genome-wide DNA methylation status of Mongolians exhibits signs of cellular stress response related to their nomadic lifestyle

  

Mean β1

     

Gene symbol

# sites

Mongolian

CEAs

Difference2

Quotient3

# significant site4

Lowest P values5

Rank

PM20D1

8

0.465

0.258

0.207

0.904

1

1.8E−06

1

GSTM5

5

0.541

0.413

0.129

0.381

0

1.6E−03

6

RAET1L

10

0.161

0.105

0.057

0.688

0

2.3E−04

15

RNF135

1

0.184

0.129

0.055

0.477

0

1.2E−02

18

NUDT12

6

0.157

0.105

0.052

0.543

0

3.8E−04

25

TRIOBP

11

0.248

0.199

0.049

0.342

0

3.5E−04

34

NRIP2

6

0.511

0.431

0.080

0.266

0

4.6E−03

35

CHD2

3

0.307

0.356

−0.050

−0.265

0

7.4E−04

39

BOLL

6

0.167

0.103

0.064

0.697

0

8.8E−03

42

PDE8A

2

0.187

0.131

0.057

0.531

0

1.5E−03

43

STMN1

12

0.429

0.380

0.049

0.270

0

5.1E−03

44

PRSS22

11

0.311

0.256

0.055

0.294

0

3.0E−03

45

TSPAN3

2

0.177

0.109

0.068

0.662

0

1.4E−02

48

DPP9

2

0.164

0.234

−0.070

−0.361

0

3.9E−03

53

MFSD14B

1

0.139

0.097

0.041

0.472

0

9.8E−05

55

SLC17A9

11

0.301

0.260

0.041

0.306

0

7.6E−04

56

ITGB1

5

0.189

0.140

0.049

0.361

0

2.3E−03

60

SLC16A11

9

0.189

0.149

0.040

0.365

0

1.1E−03

62

SORD

12

0.217

0.177

0.040

0.239

0

1.4E−04

63

NUDT4B

2

0.179

0.139

0.040

0.259

0

5.0E−03

66

IZUMO2

7

0.349

0.311

0.039

0.212

0

2.1E−03

67

TSPYL5

11

0.385

0.347

0.039

0.261

0

2.8E−03

69

TRMT12

7

0.210

0.161

0.050

0.562

0

2.8E−02

70

PABPC3

3

0.440

0.367

0.073

0.264

0

1.3E−02

72

G0S2

12

0.268

0.224

0.044

0.345

0

5.6E−03

76

SULT1A1

3

0.395

0.358

0.037

0.529

0

8.7E−03

78

XPA

1

0.083

0.119

−0.035

−0.465

0

8.9E−04

82

RPL22

4

0.199

0.161

0.038

0.310

0

1.1E−02

83

ATG4C

9

0.201

0.149

0.051

0.186

0

1.1E−04

86

MARVELD2

8

0.282

0.247

0.034

0.284

0

1.1E−04

88

RFPL2

5

0.771

0.682

0.089

0.182

0

1.2E−03

95

NEIL1

5

0.482

0.440

0.042

0.181

0

1.6E−02

98

OOEP

6

0.881

0.777

0.104

0.180

0

1.0E−05

100

  1. CEAs crop-farming East Asians
  2. 1Regional means of β of each site in each group are shown
  3. 2Regional means of differences in β calculated for each site are as follows: mean β in Mongolians—mean β in CEAs
  4. 3Regional mean of quotient calculated for each site is as follows: log2 (mean β in Mongolians + 0.01/mean β in CEAs + 0.01)
  5. 4Numbers of sites that survived the FDR adjustment are indicated
  6. 5The lowest P values among the sites are indicated